Publications - 2010

Acosta, O., Dowling, J., Cazoulat, G., Simon, A., Salvado, O., de Crevoisier, R. & Haigron, P. Atlas based segmentation and mapping of organs at risk from the planning CT for the development of voxel-wise predictive models of toxicity in prostate radiotherapy. MICCAI'10 Proceedings of the 2010 international conference on Prostate cancer imaging: computer-aided diagnosis, prognosis, and intervention. Beijing, China: Springer.

Acosta Tamayo, O., Fripp, J., Rueda, A., Xiao, D., Bonner, E., Bourgeat, P. & Salvado, O. 3D Shape Context Surface Registration for Cortical Mapping. IEEE International Symposium on Biomedical Imaging (ISBI).Rotterdam, Netherlands

Bourgeat, P., Chetelat, G., Villemagne, V., Fripp, J., Raniga, P., Acosta Tamayo, O., Szoeke, C., Ourselin, S., Ames, D., Ellis, K. A., Masters, C., Rowe, C. & Salvado, O. B-amyloid burden in the temporal neocortex is related to hippocampal atrophy in elderly subjects without dementia. Neurology, 74,121-127.

Boyle, J. PAPT - Patient Admissions Prediction Tool. ICU Management, 10,12-13,16,30.

Boyle, J. & Ireland, D. Developing a Research Prototype Forecasting Application. HIC2010.Melbourne: Health Informatics Society of Australia.

Boyle, J., Ireland, D. & Le Padellec, R. Implementing a Hospital Admission Prediction System. ISQua 2010.Paris: The International Society for Quality in Health Care Ltd.

Boyle, J., Ireland, D., Lind, J., Crilly, J., Green, D., Jessup, M. & Wallis, M. Predicting Patient Demand.

Boyle, J., Le Padellec, R. & Ireland, D. Statewide Validation of a Patient Admissions Prediction Tool. EMBC 2010 - IEEE EMBS Conference: 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society.August 31 - September 4, 2010: IEEE.

Burchfield, J., Lopez, J., Mele, K., Vallotton, P., James, D. & Hughes, W. Exocytotic Vesicle Behaviour Assessed by Total Internal Reflection Fluorescence Microscopy. Traffic, 11,429??439.

Burdett, N., Fripp, J., Bourgeat, P., Acosta Tamayo, O., Raniga, P. & Salvado, O. MILXView: A medical imaging, analysis and visualization platform. World Computer Congress 2010.Brisbane Convention and Exhibition Centre Australia: Springer.

Chetelat, G., Villemagne, V., Bourgeat, P., Pike, K., Jones, G., Ames, D., Ellis, K. A., Szoeke, C., Martins, R., O'Keefe, G., Salvado, O., Masters, C. & Rowe, C. Relationship between atrophy and beta-amyloid deposition in Alzheimer's disease. Annals of Neurology, 67,317-324.

Chetelat, G., Villemagne, V. L., Pike, K. E., Baron, J.-C., Bourgeat, P., Jones, G., Ellis, K. A., Salvado, O., Szoeke, C., Martins, R. N., Ames, D., Masters, C. L. & Rowe, C. C. Larger temporal volume in elderly with high versus low beta-amyloid deposition. Brain, 133,3349-3358.

Chu, K., Spain, D. & Wagholikar, A. Queensland Pathology Ordering Project (QPOP). The Emergency Medicine Autumn symposium.Brisbane, QLD, Australia

Comas, O., Duriez, C. & Cotin, S. p. Shell Model for Reconstruction and Real-Time Simulation of Thin Anatomical Structures. Medical Image Computing and Computer Assisted Intervention (MICCAI).Beijing, China: Springer.

De Visser, H., Passenger, J., Conlan, D., Russ, C., Hellier, D., Cheng, M., Acosta Tamayo, O., Ourselin, S. & Salvado, O. Developing a next generation colonoscopy simulator. International Journal of Image and Graphics, 10,203-217.

Ding, H., Sarela, A., Helmer, R., Mestrovic, M. & Karunanithi, M. Evaluation of Ambulatory ECG Sensors for A Clinical Trial on Outpatient Cardiac Rehabilitation. 2010 ICME International Conference on Complex Medical Engineering.Gold Coast, Australia: 2010 ICME International Conference on Complex Medical Engineering.

Dowling, J., Fripp, J., Greer, P., Patterson, J., Denham, J., Gupta, S., Tang, C., Ourselin, S. & Salvado, O. Atlas based segmentation of pelvic MRI for prostate radiotherapy. Medical Imaging 2010.SPIE.

Dowling, J., Lambert, J., Parker, J., Fripp, J., Denham, J., Wratten, C., Capp, A., Tang, C., Bourgeat, P., Salvado, O. & Greer, P. Feasibility of atlas-based organ segmentation and electron density mapping for MRI-based prostate radiation therapy planning. 56th Canadian Organisation of Medical Physicists Meeting.Ottowa, Canada Ottowa: Med Physics.

Dowling, J., Lambert, J., Parker, J., Greer, P., Fripp, J., Ourselin, S. & Salvado, O. Automatic MRI atlas-based external beam radiation therapy treatment planning for prostate cancer. Prostate Cancer Imaging. Computer-Aided Diagnosis, Prognosis, and Intervention.Heideliberg, Germany

Beijing, China: Springer Verlag.

Dowson, N., Bourgeat, P., Rose, S., Dalglish, M., Smith, J., Fay, M., Coulthard, A., Macfarlane, D., Thomas, P., Crozier, S. & Salvado, O. Joint Factor and Kinetic Analysis of Dynamic FDOPA PET Scans of Brain Cancer Patients. MICCAI. Beijing, China: Springer.

Dowson, N. & Salvado, O. Hashed Nonlocal Means for Rapid Image Filtering. IEEE Transactions on Pattern Analysis and Machine Intelligence, 33,485-499.

Dowson, N. & Salvado, O. Compact Rotation Invariant Descriptor for Non-Local Means. SPIE Medical Imaging.San Diego, California, USA: SPIE.

Dowson, N. & Salvado, O. Rotation invariant descriptors for non-local means. Medical Imaging 2010.SPIE.

Ellis, K. A., Rowe, C., Villemagne, V., Martins, R., Masters, C., Salvado, O., Szoeke, C. & Ames, D. Addressing population aging and Alzheimer??s disease through the Australian Imaging Biomarkers and Lifestyle (AIBL) study: an ADNI experience in Australia. Alzheimer's and Dementia, 6,291-296.

Fripp, J., Acosta Tamayo, O., Chetelat, G., Bourgeat, P., Raniga, P., Szoeke, C., O'Keefe, G., Ellis, K., Martins, R., Villemagne, V., Masters, C., Ames, D., Rowe, C. & Salvado, O. Automated MR brain analysis using MILXview: Comparison with FreeSurfer and FSL FIRST for cortical thickness estimation, deep gray matter and ventricular segmentation. Alzheimer's Association International Conference on Alzheimer's Disease 2010 (ICAD).Hawaii: Alzheimer's Association.

Fripp, J., Crozier, S., K., W. S. & Ourselin, S. Automatic segmentation and quantitative analysis of the articular cartilages from magnetic resonance images of the knee. IEEE Trans. Med. Imag., 29,55-64.

Fripp, J., Crozier, S., Warfield, S. & Ourselin, S. Automatic Segmentation and Quantitative Analysis of the Articular Cartilages From Magnetic Resonance Images of the Knee. Medical Imaging, IEEE Transactions on, 29,55-64.

Frost, S., Martins, R. & Kanagasingam, Y. Ocular Biomarkers for Early Detection of Alzheimer's Disease. Journal of Alzheimer's Disease, 22,1-16.

Garcia, E., Ding, H., Sarela, A. & Karunanithi, M. Can a mobile phone be used as a pedometer in an outpatient cardiac rehabilitation program? 2010 ICME International Conference on Complex Medical Engineering.Gold Coast QLD: IEEE.

Gris, F., Favreau, J.-M., Acosta, O., Barra, V. & Salvado, O. Validation of a voxel and surface based hybrid method for topological correction with geometry conservation. Medical Imaging 2010.SPIE.

Gris, F., Favreau, J.-M., Acosta Tamayo, O., Barra, V. & Salvado, O. A combined voxel and surface based method for topology correction of brain surfaces. SPIE Medical Imaging.San diego

Guitera, P., Bourgeat, P., Stretch, J. R., Scolyer, R. A., Ourselin, S. & et al. Diagnostic value of 8.5T magnetic resonance spectroscopy of benign and malignant skin lesion biopsies. J. Melanoma Research, 20,311-317.

Gunn, C. & stevenson, D. RIDES: Enabling Interaction in Telehealth Consultations. Global Telehealth 2010.Fremantle, Western Australia: IOS Press.

Gurney, P. Translating Research into outcomes: eHealth research programs for health system adoption. World Computer Congress. http://www.ifip.org/wcc2010 Brisbane Convention Centre: IFIP.

Hansen, D. Using Clinical Terminologies to Enhance Data Mining of Genomic Data. IEEE ICDM2010.Sydney: IEEE.

Jessup, M., Wallis, M., Boyle, J., Crilly, J., Lind, J., Green, D., Miller, P. & Fitzgerald, G. Implementing an emergency department patient admission predictive tool: insights from practice. Journal of Health Organization and Management, 24,306-318.

Karunanithi, M. Empowering Citizens for Wellbeing and Chronic Disease Management with Wellness Diary. IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE, 14,456-463.

Karunanithi, M., Varnfield, M., Ding, H. & Garcia, E. Care Assessment Platform: An ICT-enabled home care model for secondary prevention of cardiovascular diseases. 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society. Buenos Aires, Argentina: IEEE EMBS.

Koopman, B., Bruza, P., Sitbon, L. & Lawley, M. Analysis of the effect of negation on information retrieval of medical data. The Fifteenth Australasian Document Computing Symposium.Melbourne: ADCS.

Lawley, M., Hansen, D., Kemp, M., Vickers, D. & Truran, D. Agreeing on meaning: a fundamental of sharing health information. HISA Health Informatics Conference 2010.Melbourne

Leung, K., Shen, K., Barnes, J., Ridgway, G., Bartlett, J., Clarkson, M., Fripp, J., Salvado, O., Fox, N., Meriaudeau, F., Bourgeat, P. & Ourselin, S. Increasing power to predict mild cognitive impairment conversion to alzheimer's disease using hippocampal atrophy rate and statistical shape models. MICCAI'10 Proceedings of the 13th international conference on Medical image computing and computer-assisted intervention: Part II.Beijing, China: Springer.

Madabhushi, A., Dowling, J., Yan, P., Fenster, A., Abolmaesumi, P. & Hata, N. Prostate Cancer Imaging: Computer Aided Diagnosis, Prognosis, and Intervention.Heidelberg, Germany, Springer.

Nguyen, A., Lawley, M., Hansen, D. & Colquist, S. Structured Pathology Reporting for Cancer from Free Text: Lung Cancer Case Study. Health Informatics Conference.Melbourne: HISA.

Nguyen, A., Lawley, M., Hansen, D., Colquist, S. & Bowman, R. Symbolic Rule-based Classification of Lung Cancer Stages from Free-Text Pathology Reports. Journal of the American Medical Informatics Association, 17,440-445.

Nguyen, P., Brent, M., Salvado, O. & David, F. Combining Autofluorescence and Narrow Band Imaging With Image Analysis in the Evaluation of Preneoplastic Lesions in the Bronchus and Larynx. Journal of Bronchology and Interventional Pulmonology, 17,109-116.

Pang, C., Zhang, R., Zhang, Q. & Wang, J. Dominating Sets in Directed Graphs. Information Sciences, 180,3647-3652.

Raniga, P., Fripp, J., Acosta Tamayo, O., Bourgeat, P., Szoeke, C., Ourselin, S., O'Keefe, G., Ellis, K. A., Martins, R., Chetelat, G., Villemagne, V., Masters, C., Rowe, C. & Salvado, O. Effects of partial volume correction on the analysis of 11C-PiB PET in assessing Alzheimer??s disease. ICAD 2010.Hawaii: Alzheimer's Association.

Rose, S., Crozier, S., Bourgeat, P., Dowson, N., Salvado, O., Raniga, P., Pannek, K., Coulthard, A., Fay, M., Thomas, P. & Macfarlane, D. Improved Delineation of Brain Tumour Margins using Whole-brain Track-Density Mapping. International Society for Magnetic Resonance in Medicine 17th Scientific Meeting & Exhibition. Honolulu, Hawaii, USA: ISMRM.

Rowe, C., Ellis, K. A., Rimajova, M., Bourgeat, P., Pike, K., Jones, G., Fripp, J., Tochon-Danguy, H., Morandeau, L., Price, R., O'Keefe, G., Raniga, P., Robins, P., Acosta Tamayo, O., Lenzo, N., Szoeke, C., Salvado, O., Head, R., Martins, R., Masters, C., Ames, D. & Villemagne, V. Amyloid Imaging Results from the Australian Imaging, Biomarkers and Lifestyle Study of Ageing (AIBL). Neurobiology of Aging, 31,1275-1283.

Rueda, A., Acosta Tamayo, O., Couprie, M., Bourgeat, P., Fripp, J., Romero, E. & Salvado, O. Topology-corrected segmentation and local intensity estimates for improved partial volume classification of brain cortex in MRI. Journal of Neuroscience Methods, 188,305-315.

Shen, K., Bourgeat, P., Fripp, J., Meriaudeau, F., Acosta, O., Chetelat, G., Villemagne, V., Ames, D., Ellis, K. A., Masters, C., Rowe, C. & Salvado, O. Supervised method to build an atlas database for multi-atlas segmentation-propagation. Medical Imaging 2010.SPIE.

Shen, K., Bourgeat, P., Fripp, J., Meriaudeau, F., Acosta Tamayo, O., Chetelat, G., Villemagne, V., Ames, D., Ellis, K. A., Masters, C., Rowe, C. & Salvado, O. Supervised Method to Build an Atlas Database for Multi-atlas Segmentation-propagation. SPIE Medical Imaging.San Diego, California, USA: SPIE.

Stanbridge, C. Retrospective Requirement Analysis Using Code Coverage of GUI Driven System Tests. 2010 18th IEEE International Requirements Engineering Conference (RE). Sydney: IEEE.

Stanbridge, C., Cattalini, C., Dempsey, J. & Ryan-Brown, J. Experiences in Measuring Code Coverage from GUI Driven Tests. Australian Software Engineering Conference 2010. Auckland NZ: Engineers Australia and Australian Computer Society.

Varnfield, M., Garcia, E., Karunanithi, M., Oldenburg, B. & Bird, D. USER ADOPTION OF TECHNOLOGY IN CHRONIC DISEASE SELF-MANAGEMENT: PATTERNS IN ADHERENCE. Australian Disease Management Association.Melbourne: ADMA.

Varnfield, M., Hansen, D., Sarela, A. & Karunanithi, M. Health Education in a Six Week ITC Supported Home-based Cardiac Rehabilitation Program. 27th International Conference of the International Society for Quality in Health Care (ISQua).Marriott Rive Gauche Hotel in Paris, France.: ISQua.

Varnfield, M., Karunanithi, M. & Sarela, A. Patient Acceptance of Technology in an ICT Assisted Cardiac Rehabilitation Program. ITAC 10.Melbourne: Conference program.

Villemagne, V., Perez, K. A., Pike, K., Kok, W. M., Rowe, C., White, A. R., Bourgeat, P., Salvado, O., Bedo, J., Hutton, C. A., Faux, N., Masters, C. & Barnham, K. J. Blood borne ABeta dimer correlates with clinical markers of Alzheimer's disease. Journal of Neurosciences, 30,6315??? 6322.

Wagholikar, A., Nguyen, A. & Fung, M. Patient Identification for Advanced Prostate Cancer Clinical Trials. 2010 Australian Canadian Prostate Cancer Research Alliance (AC-PCRA) Symposium.Gold Coast, Queensland, Australia: The Australian Prostate Cancer Research Centre-Queensland.

Wilson, L. Telehealth at the crossroads. Australian Hospital & Healthcare Bulletin,14-18.

Xiao, D., Bourgeat, P., Zahra, D., Fripp, J., Acosta Tamayo, O., Berghofer, P., Gregoire, M.-C. & Salvado, O. An improved 3D shape context based non-rigid registration method and its application to small animal skeletons registration. computerized medical imaging and graphics, 34,321-332.

Xiao, D., Zahra, D., Bourgeat, P., Berghofer, P., Acosta, O., Wimberley, C., Gregoire, M.-C. & Salvado, O. A non-rigid registration approach for mouse muscle using statistical shape modeling. Medical Imaging 2010.SPIE.

Xiao, D., Zahra, D., Bourgeatt, P., Berghofer, P., Acosta, O., Wimberley, C., Gregoire, M.-C. & Salvado, O. An improved 3D shape context based registration method for non-rigid surface registration. Medical Imaging 2010.SPIE.

Xie, F., Huang, Z., Shen, H. T., Zhou, X. & Pang, C. Efficient and Continuous Near-duplicate Video Detection. Web Conference (APWEB), 2010 12th International Asia-Pacific. APWEB 2010 Busan, Korea: SPRINGER.

Yu, w., Zhang, w., Lin, X., Zhang, Q. & Le, j. A space and time efficient algorithm for simrank computation. World Wide Web, Online First,164-170.

Zhang, Q., Pang, C., McBride, S., Hansen, D., Cheung, C. & Steyn, M. Towards Clinical Stream Data Monitoring. 2010 IEEE/ICME International Conference on Complex Medical Engineering.Gold Coast, Queensland, Australia: IEEE.

Zhang, Q., Pang, C., Xie, F., McBride, S., Hansen, D. & Zhang, Y. ADA: An Online Trend Pattern Detection System. 2nd International Conference on Software Engineering and Data Mining. chengdu China: IEEE.

Last Updated on Wednesday, 29 May 2013 14:46

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